PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019196827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 508aa MW: 54851.4 Da PI: 9.3179 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_019196827.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.7 | 0.00038 | 171 | 193 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_019196827.1 171 WKCDKCSKRYAVQSDWKAHSKTC 193 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence |
MMMKGVMIHQ PNLDNQENMS NVTSAASGEA SVSSSNGGVY PHQQHYFGGN TINQPQPQPQ 60 PQQIKKKRNQ PGNPDPDSEV IALSPKTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRSSKDV VRKKVYVCPE TNCVHHDPSR ALGDLTGIKK HFCRKHGEKK WKCDKCSKRY 180 AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAEESARAI TGNNNNNNNA 240 FHHHHLNSQP RSSSAPLSNN ISLHFQPPQF TADFSAVKKE QTNTAAAGGF NLRPEIPPWL 300 LPGGGSPHPQ PQPPPPPPPI DMTHSIFQEF GGGGLPGFHS AVGSPHISAT ALLQKAAQMG 360 ATMTGSGGPT TLVMSGPHLA HVSSDQPDFG LNLSSRGAGG LLDGLASFGG KATVSAAAPS 420 ASAAPSASFL HDMMNSFSSN NPPFEDPLFG SFFNNKKDAG AGAGVVNDDI TKDFLGLRPL 480 SRTDIFNITG GLVNSPADQS QKTWQQSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 134 | KLKQRSSKDVVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13810.1 | 1e-114 | C2H2 family protein |