PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196804.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 296aa MW: 33652.3 Da PI: 7.0079

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	7	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k+++ ++++ +i+e+d+yk++PwdLp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_019196804.1 7 LPPGFRFHPTDEELVMHYLCRKCASLPISV-PIIAEIDLYKFDPWDLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQ- 99 79**************************.88***********6666689*********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy+g+apkgekt+W+mheyrl XP_019196804.1 100 -PKPVGIKKALVFYSGKAPKGEKTNWIMHEYRL 131 .789*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MTGGLQLPPG FRFHPTDEEL VMHYLCRKCA SLPISVPIIA EIDLYKFDPW DLPDMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGRGYWKA TGADKPIGQP KPVGIKKALV FYSGKAPKGE 120 KTNWIMHEYR LADVDRSARK KSNSLRLDDW VLCRIYNKKG ELDKADVNSR KMSKATARSQ 180 VSEEEEKKPE MMLPPPPPPQ QVFSDFLYLE PSDSIPKLHT ESSCSEHVLS PEFTCEREVQ 240 SEARLNEWDK TALNFQFNYQ NAGAGSAVDG GFLGCGDLAG SYDPWPLQDM LLYKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-128	NAC family protein