PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196559.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 323aa    MW: 34134 Da    PI: 5.6091
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.17.8e-16235270134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp g+++LCnaCGl+++ kg
  XP_019196559.1 235 CTHCGNSSksTPMMRRGPAGPRSLCNACGLKWANKG 270
                     ******9999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAEAISRVTM SMYGAEPEHH APPIDDGEEE DDDGVSVTDV GGGGEDSVDG TSPHIQFEPR  60
SHALVLHGSM DAAMNGAEGV SPHGVYAPGG SDVVPAPAAG DAADQLTLSF QGEVYVFDAV  120
SPEKVQAVLL LLGGYEVPSG IPAAAVAPQT HRGMGEYPGR FSQPQRIASL NRFREKRKER  180
CFDKKIRYTV RKEVALRMQR KKGQFTSSKW VCDEAGSSSA DRNSSSGQEE QEIFCTHCGN  240
SSKSTPMMRR GPAGPRSLCN ACGLKWANKG ILRDLSKVPT TGVQDHNVKA GGQLNGEAIG  300
PDALTGANVI MTNGGNSAPI AEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-79GATA family protein