PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196527.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 359aa MW: 38976.5 Da PI: 8.1442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	17	147	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhP+deel+++yL+kk++g+ ++l + evd++k+ePwd+p + + k+wyf+s+rd+kyatg r+nrat sgyWkatgkd++v XP_019196527.1 17 LPPGFRFHPRDEELICDYLAKKINGSAdpHHLRPPfLIEVDLNKCEPWDIPVIACVGGKDWYFYSQRDRKYATGLRTNRATVSGYWKATGKDRPV 111 79*********************9965444333499*********65556899******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_019196527.1 112 IS-KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 147 .999****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSSGGGGGSL SMVEAKLPPG FRFHPRDEEL ICDYLAKKIN GSADPHHLRP PFLIEVDLNK 60 CEPWDIPVIA CVGGKDWYFY SQRDRKYATG LRTNRATVSG YWKATGKDRP VISKGTLVGM 120 RKTLVFYQGR APKGRKTDWV MHEFRLEGPL GPPQLSSTKE DWVLCRVFHK SKEIPSAKQG 180 IVSGGGGGSY TTTYDHHHDV AITSSSSLPP LMDPYGGIGF TQTHPNNSNA ALLNDYYEQV 240 PCFSIFNPNH PAATSAAAPS AFHNPAAAAT TVFNALPADI CAYFNSGSSS STDKNVIKAV 300 LGHLNINYNN NNNHTNINNN VNNMVNVKSG GSPSFGEGSS ESTSFLSEVG LNSIWNNDY

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSSGGGGGSL SMVEAKLPPG FRFHPRDEEL ICDYLAKKIN GSADPHHLRP PFLIEVDLNK  60
CEPWDIPVIA CVGGKDWYFY SQRDRKYATG LRTNRATVSG YWKATGKDRP VISKGTLVGM  120
RKTLVFYQGR APKGRKTDWV MHEFRLEGPL GPPQLSSTKE DWVLCRVFHK SKEIPSAKQG  180
IVSGGGGGSY TTTYDHHHDV AITSSSSLPP LMDPYGGIGF TQTHPNNSNA ALLNDYYEQV  240
PCFSIFNPNH PAATSAAAPS AFHNPAAAAT TVFNALPADI CAYFNSGSSS STDKNVIKAV  300
LGHLNINYNN NNNHTNINNN VNNMVNVKSG GSPSFGEGSS ESTSFLSEVG LNSIWNNDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	5e-98	NAC family protein