PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196263.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 425aa    MW: 46075.5 Da    PI: 9.387
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.2e-05192214223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C++Cg+ F  ++ L+ H  + H
  XP_019196263.1 192 SCHKCGEQFGKWEALEAHHLSkH 214
                     6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MGEKKNMPTV WFSLKRSMHC KSEPSEVHNP KTRKELNTIL TRKPGRSGCS RSIANLKDVI  60
HGSKRHLEKP PSCSPRSIGS SEFLNPITHE VVLRNNSRCE LRITSFGGFP DGLGGGGGGG  120
GGGSFVGTLM PGTPGPGGHH TMHYFSSSQR NPAATPPRRT NSASFGEKEG IGFASKPRTS  180
LQTDSNGCSS VSCHKCGEQF GKWEALEAHH LSKHAVTELL EGDSSRKIVE IICRSSWLKS  240
ESQGGRIEKV LKVHNTQKTL ARFEEYREAV KMKASKLPKK HPRCLADGNE LLRFYGTTVG  300
CSLGTGGGCS LCTSDKCYVC QIIRNGFSTE NELKDGIGVF TTSTSGRAFE SIEASEGDPP  360
PRKALIVCRV IAGRVHRPLE NIQEMAGQIG FDSLAGKVGL YSNIEELYLL NPRALLPCFV  420
VICKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-119C2H2 family protein