PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019196263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 425aa MW: 46075.5 Da PI: 9.387 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6.2e-05 | 192 | 214 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F ++ L+ H + H XP_019196263.1 192 SCHKCGEQFGKWEALEAHHLSkH 214 6*****************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 425 aa Download sequence |
MGEKKNMPTV WFSLKRSMHC KSEPSEVHNP KTRKELNTIL TRKPGRSGCS RSIANLKDVI 60 HGSKRHLEKP PSCSPRSIGS SEFLNPITHE VVLRNNSRCE LRITSFGGFP DGLGGGGGGG 120 GGGSFVGTLM PGTPGPGGHH TMHYFSSSQR NPAATPPRRT NSASFGEKEG IGFASKPRTS 180 LQTDSNGCSS VSCHKCGEQF GKWEALEAHH LSKHAVTELL EGDSSRKIVE IICRSSWLKS 240 ESQGGRIEKV LKVHNTQKTL ARFEEYREAV KMKASKLPKK HPRCLADGNE LLRFYGTTVG 300 CSLGTGGGCS LCTSDKCYVC QIIRNGFSTE NELKDGIGVF TTSTSGRAFE SIEASEGDPP 360 PRKALIVCRV IAGRVHRPLE NIQEMAGQIG FDSLAGKVGL YSNIEELYLL NPRALLPCFV 420 VICKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G27240.1 | 1e-119 | C2H2 family protein |