PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019195613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 227aa MW: 26094.2 Da PI: 6.1758 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.9 | 3.4e-18 | 34 | 84 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f++eq++ Le++F + ++ a+++ +LA+ lgL+ rqV +WFqN+Ra++k XP_019195613.1 34 RFSHEQVKLLESMFTLETKLEAHKKLQLARDLGLQPRQVGIWFQNKRARWK 84 69************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 112.8 | 2.2e-36 | 32 | 122 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +r+s+eqvklLE++F+ e+kLe ++K +lar+Lglqprqv +WFqn+RAR+k+kq+E+dy+ Lk+++d+l+ + + L++e+++L +l++ XP_019195613.1 32 CKRFSHEQVKLLESMFTLETKLEAHKKLQLARDLGLQPRQVGIWFQNKRARWKAKQIEQDYRELKAKFDNLNVQFDYLKNENQSLLMQLEK 122 58***********************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MEGGDHHQYP GPEDHEPVRC QQPSSKKKGE NCKRFSHEQV KLLESMFTLE TKLEAHKKLQ 60 LARDLGLQPR QVGIWFQNKR ARWKAKQIEQ DYRELKAKFD NLNVQFDYLK NENQSLLMQL 120 EKLRSEVENK PAGHRKIQDS KGSKVFRDSD SKDANFGTKE NPEIKRGEDA NELGINEYLE 180 QQEEEAEFLN LGGLGGDSPL SSQENWCCIG LGDAFCHSCG TSKLWDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-34 | HD-ZIP family protein |