PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019195569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 23641.5 Da PI: 8.1065 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.2 | 3.8e-24 | 113 | 171 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 Dg++W+KYG+K+v++s++++sYYrC ++ +Cp+kk+++ s+ d++ +itY+g+Hnh+ XP_019195569.1 113 DGWAWKKYGKKMVNDSPHSKSYYRCNHEgkNCPAKKHIQLSHMDESKYIITYRGNHNHP 171 9**************************999****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVPERRHFGL EEVIDRFTSG KMREPVLDPQ GTITPPTGLD KAGGSGGIWK NTPAPPQSPN 60 PSPTGSPEKD GGLEDEMLPH EVEEVNEVEM PAEKVPVPVE KVEVPVEKVD EWDGWAWKKY 120 GKKMVNDSPH SKSYYRCNHE GKNCPAKKHI QLSHMDESKY IITYRGNHNH PPPVQNTTTK 180 PRKRGRARAQ ARAPAPPAPK GECSSSTPST NTAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 193 | RGRARAQARA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.1 | 2e-17 | WRKY family protein |