PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195564.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 282aa MW: 32211.3 Da PI: 6.5857

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	184.9	1.9e-57	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeel+++yL++kv+++++++ ++ evd++kvePwdLp ++k +ekewyfF+ rd+ky+tg+r+nrat++gyWkatgkd+e+++ XP_019195564.1 18 MPPGFRFHPTDEELISHYLCPKVADSRFSA-AAMGEVDLNKVEPWDLPWRAKMGEKEWYFFCVRDRKYPTGQRTNRATEAGYWKATGKDREIFR- 110 79************************99.78***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfykgrapkg+kt+Wvmheyrle XP_019195564.1 111 AKTLVGMKKTLVFYKGRAPKGQKTNWVMHEYRLE 144 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MENTSGFSGV EEEMELHMPP GFRFHPTDEE LISHYLCPKV ADSRFSAAAM GEVDLNKVEP 60 WDLPWRAKMG EKEWYFFCVR DRKYPTGQRT NRATEAGYWK ATGKDREIFR AKTLVGMKKT 120 LVFYKGRAPK GQKTNWVMHE YRLEGNYSIP NHKNEWVICR VFKKTSGGHK IHISGLTRGE 180 GLPALMEVSA TSGEAMPHVT CFSGSKEDKK PIAPHFSSSK NSDFSGVFPS LEFQHYSEPD 240 DHSVLRLWLE NNGLQAKQDN DDDEFLMSSE AGPVDLDCLW NY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	1e-106	NAC family protein