PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195279.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 488aa MW: 53224.1 Da PI: 5.5927

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	115.1	2.9e-36	135	194	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprCds++tkfCy+nny+++qPr+fCk+C+ryWt GG rn+PvG+grrk k+s XP_019195279.1 135 PDKILPCPRCDSMDTKFCYFNNYNTNQPRHFCKKCQRYWTSGGMTRNLPVGAGRRKTKNS 194 7899****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MPEPTKDPTI KLFGMTIQFP DAPPPPPPTE MDVDPGGAAS EANSLAKDSS CSEAEPGEDE 60 QQQKNENGER MDESKEDEGT VLMEGEGIMD QTVDEIRDGL KAPHVDEDCG STEISTTDEE 120 EGKMSNGKDK TLKKPDKILP CPRCDSMDTK FCYFNNYNTN QPRHFCKKCQ RYWTSGGMTR 180 NLPVGAGRRK TKNSAAHYHL NAVKSFQNAC VDHPERIQHH ALKANGKVLT LASDSVASEL 240 NIAEKTAGNG SLNGFYKPVE LGIQVSYGAG DNGADHSSGS SSVTAASTKD DVCKNGLPDM 300 LKQNYHGFAP QLPCFQAPPW PYPSSAVQWS SAVPPPGCFS PGFPMPFYPP AMYLGYTIPC 360 SWNAPWVSRP VAPQHHTSSG PNSPTLGKHS RDDNNKEGEP QPPKDSNPEK CLWVPKTLRF 420 DDPEDAAKSS IWATLGIQHD RVDSIRGGAF KAFKMKDDEN SHASKNCRVL LEANPAALSR 480 SLNFHESS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MPEPTKDPTI KLFGMTIQFP DAPPPPPPTE MDVDPGGAAS EANSLAKDSS CSEAEPGEDE  60
QQQKNENGER MDESKEDEGT VLMEGEGIMD QTVDEIRDGL KAPHVDEDCG STEISTTDEE  120
EGKMSNGKDK TLKKPDKILP CPRCDSMDTK FCYFNNYNTN QPRHFCKKCQ RYWTSGGMTR  180
NLPVGAGRRK TKNSAAHYHL NAVKSFQNAC VDHPERIQHH ALKANGKVLT LASDSVASEL  240
NIAEKTAGNG SLNGFYKPVE LGIQVSYGAG DNGADHSSGS SSVTAASTKD DVCKNGLPDM  300
LKQNYHGFAP QLPCFQAPPW PYPSSAVQWS SAVPPPGCFS PGFPMPFYPP AMYLGYTIPC  360
SWNAPWVSRP VAPQHHTSSG PNSPTLGKHS RDDNNKEGEP QPPKDSNPEK CLWVPKTLRF  420
DDPEDAAKSS IWATLGIQHD RVDSIRGGAF KAFKMKDDEN SHASKNCRVL LEANPAALSR  480
SLNFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-86	Dof family protein