PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195235.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 262aa    MW: 28647 Da    PI: 5.1994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1982132155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +++Wv+eIr+p++   +kr++lg++ t+e+Aa+a++ a+++l+g
  XP_019195235.1  82 PVYRGVRQRN-NNKWVCEIREPTK---QKRIWLGTYPTPEMAARAHDVAALALRG 132
                     68*****999.8*********964...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDYSTSNSDP NYCGGYGFPQ GEGWSGSRAS HSDPNFCGGY GFPQGEGWSG GRASHSDEEV  60
ILAESRPKKR AGRKKFKETR HPVYRGVRQR NNNKWVCEIR EPTKQKRIWL GTYPTPEMAA  120
RAHDVAALAL RGQFAATLNF ADSVWRLPVP ASIDAKDLRK AAVEAAEAFR PKECEEEIVI  180
ATPTSVEAPP PPPPVDGTWN VLMPSPPIME PDGFLTGMQG GFLGSMTDGN LLSPAPSLGK  240
GFSWDEVEVE SDVEVSLWSY SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.16e-48ERF family protein