PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195159.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 388aa    MW: 43130.4 Da    PI: 4.2264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-193382255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_019195159.1 33 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 82
                    789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MARKRKGSEG LDEGNVAAWE EAALGGGRRA RKRFVGVRQR PSGRWVAEIK DTIQKIRVWL  60
GTFDTAEEAA RAYDEAACLL RGANTRTNFW PCSSSSSSAP ALPSKITNLL LTRLKARNNS  120
LAGNGAPSSA PACFQQVNQV QDDECRDEAA EFSESHFTDY LNDPDDCTAE SSMIIPEISL  180
ESCNLTETVN SCGATEQGCN YESQNCAVQV HDEAEEEEEI EEEENSDDLS VVDFQFVDEI  240
GSCYFSPFEM AEEISESMEH QQAVYGEGEG EELSMISETM KRMNYERKFS ASLYAFNGIT  300
ECLKLKLKSG RERSDQLSRL RNACKMSREK EEMKKDEEKE EIVVEKKEEE TGDNASSSPS  360
SSSSSSTAFD NESSMWSSID LPPICFVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-22ERF family protein