PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195114.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 579aa MW: 63650.1 Da PI: 4.9104

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171	3.8e-53	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeelv++yLk k++g++ e+ +vi+evdi+k+ePwdLp + v+++++ew+fF+++d+ky++g+r nrat++gyWkatgkd+++ XP_019195114.1 18 LPVGYRFRPTDEELVDHYLKMKITGSEAEV-SVIREVDICKHEPWDLPdMsFVESHDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRTIS 111 799**********************999.99**********96347788999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s+kg++vg+kktLv+y grap+g++t+Wv+heyr XP_019195114.1 112 SRKGAKVGMKKTLVYYLGRAPEGKRTHWVIHEYRT 146 *******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAVLKVERPT GLPPLHSLPV GYRFRPTDEE LVDHYLKMKI TGSEAEVSVI REVDICKHEP 60 WDLPDMSFVE SHDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRTI SSRKGAKVGM 120 KKTLVYYLGR APEGKRTHWV IHEYRTTENK FDGTHAGQAP FVLCRLFRKV ELKLDEGAEI 180 SNSDEVDPIV SSPTVVKTPA EDEQSEGGTP LMKSGHIKTQ PLTPGQSSEE TPGVHFPIDS 240 NSNSCIADTT EDQVLDITSN PADPDLDALK FFIDPSTGPI YSPTYEQMPE FGSSYFYGDV 300 INCISNNNDV QFQYGTNGFD PNEFLNPAAL VSSDGESEEV TQMLAEPVGF ENELFVTNNQ 360 EALLQRQVNY VANSLVGTFG TPTMGSDHQN WNLDLQNNNY LGQSLFSSVS NGTVAPQMVF 420 PQAETVGNIS SSAPAITLRT RQPQNQRGDQ QSAAQGTAPR RIRFQKKLQV GPVQCLRPQT 480 TPEDNTVSKE DASTVDKPNS TASATAQDPI LEGRGEVNSG IITSVKELET AACGNGRSAK 540 ASSKTALCSA SSSIYIPKVL VVVSLVVVFV GAWACFVRL

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAVLKVERPT GLPPLHSLPV GYRFRPTDEE LVDHYLKMKI TGSEAEVSVI REVDICKHEP  60
WDLPDMSFVE SHDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRTI SSRKGAKVGM  120
KKTLVYYLGR APEGKRTHWV IHEYRTTENK FDGTHAGQAP FVLCRLFRKV ELKLDEGAEI  180
SNSDEVDPIV SSPTVVKTPA EDEQSEGGTP LMKSGHIKTQ PLTPGQSSEE TPGVHFPIDS  240
NSNSCIADTT EDQVLDITSN PADPDLDALK FFIDPSTGPI YSPTYEQMPE FGSSYFYGDV  300
INCISNNNDV QFQYGTNGFD PNEFLNPAAL VSSDGESEEV TQMLAEPVGF ENELFVTNNQ  360
EALLQRQVNY VANSLVGTFG TPTMGSDHQN WNLDLQNNNY LGQSLFSSVS NGTVAPQMVF  420
PQAETVGNIS SSAPAITLRT RQPQNQRGDQ QSAAQGTAPR RIRFQKKLQV GPVQCLRPQT  480
TPEDNTVSKE DASTVDKPNS TASATAQDPI LEGRGEVNSG IITSVKELET AACGNGRSAK  540
ASSKTALCSA SSSIYIPKVL VVVSLVVVFV GAWACFVRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-80	NAC family protein