PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195020.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 292aa    MW: 32484.6 Da    PI: 6.8685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-11133178454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er+RR+++ ++f  L  +lP +     kK++Ka++Le+A++++k+L
  XP_019195020.1 133 EHVLAERKRRENLTQKFIALSAILPGL-----KKVDKASVLEEAIKHLKEL 178
                     5999***********************.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEGSSISWFT ELGEVDDYYD FVDGFIAQNS VTTQEEVQKR SSQSSPESYT SDYSIFAPKD  60
NGNNVSGTTI CFGGGGGGSA LPESLDFQAD GGFERQPVKR LKVDDNKKSC SFHVLSGSTK  120
GGDDVRRCSV AREHVLAERK RRENLTQKFI ALSAILPGLK KVDKASVLEE AIKHLKELKE  180
RVKQLEEQGN KTRSEEPAVV GRSSDEASPE IEVRFSGDNV LIRLHCSKNK RGKSSLSFFL  240
REVEMLHLSV VNSFMTPFGK HAMDFTLVAQ MDENFCMKPK DVVKHLQCIT RS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-40bHLH family protein