PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GRAS
Protein Properties Length: 426aa    MW: 47834.2 Da    PI: 8.1124
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.69.1e-103424231374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA +vssgdl++a+ +L ++ + +s + d+m+Rla+ f+ ALa rl++ ++++ykal++s+       +   a+++f ++ P+l f++
  XP_019195005.1  42 LIKLLFTCASHVSSGDLHQADVCLRQIFQFSSASNDSMHRLATWFASALAVRLVKRWPGVYKALNCSSLM---KFDLDRARSIFTKALPYLGFAY 133
                     689******************************************************************8...6677778999************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                      + N+++++a+ ge+ vH++D++ s +  W+++++ La+ p+gpp+lRiT v+s    +k++l ++g rL+k Ae+l+++f+fn+ v  +l dl+
  XP_019195005.1 134 AVINRTLVQAMLGERVVHVVDLGSSDPKLWVPFMRILATSPDGPPHLRITCVSS----NKNALDKLGVRLKKEAEQLDMSFQFNP-VNVHLRDLN 223
                     ******************************************************....99*************************.7999***** PP

            GRAS 191 leeL.rvkpgEalaVnlvlqlhrll.............desvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                     ++++ +v +gEala  +vl+lh ll             ++s ++++  + de+L+ + slsPk+v +veqe++hn +++++rf+e l+yysa+fd
  XP_019195005.1 224 FSSIvKVTSGEALAFISVLNLHVLLaeddridaqfglnKDSKNIKHckHADEFLEKLCSLSPKLVMLVEQESNHNLQKLVDRFVEGLRYYSAMFD 318
                     **9967888****************************9555555555599********************************************* PP

            GRAS 270 sleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWk 363
                     s+++ +  +  eer  vE++ +g+ei+n+vac g er+erh ++++W  rl++a F+pv+l  +++++a + ++ +++dgy++ +++gsl++gW+
  XP_019195005.1 319 SINVAFKGALcEERLLVEEM-IGKEIENIVACDGLEREERHDKFANWMVRLGRAKFRPVRLWGDTMDDAIRFVESYGVDGYKISSQKGSLMIGWH 412
                     **999876667********9.************************************************************************** PP

            GRAS 364 drpLvsvSaWr 374
                     drp++svS W+
  XP_019195005.1 413 DRPIYSVSGWT 423
                     **********5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MSSQLSLSKS NVSLSLSLSP TTTSTDGAIC DVLKSENNGI KLIKLLFTCA SHVSSGDLHQ  60
ADVCLRQIFQ FSSASNDSMH RLATWFASAL AVRLVKRWPG VYKALNCSSL MKFDLDRARS  120
IFTKALPYLG FAYAVINRTL VQAMLGERVV HVVDLGSSDP KLWVPFMRIL ATSPDGPPHL  180
RITCVSSNKN ALDKLGVRLK KEAEQLDMSF QFNPVNVHLR DLNFSSIVKV TSGEALAFIS  240
VLNLHVLLAE DDRIDAQFGL NKDSKNIKHC KHADEFLEKL CSLSPKLVML VEQESNHNLQ  300
KLVDRFVEGL RYYSAMFDSI NVAFKGALCE ERLLVEEMIG KEIENIVACD GLEREERHDK  360
FANWMVRLGR AKFRPVRLWG DTMDDAIRFV ESYGVDGYKI SSQKGSLMIG WHDRPIYSVS  420
GWTCFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-100GRAS family protein