PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019195005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRAS | ||||||||
Protein Properties | Length: 426aa MW: 47834.2 Da PI: 8.1124 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 335.6 | 9.1e-103 | 42 | 423 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA +vssgdl++a+ +L ++ + +s + d+m+Rla+ f+ ALa rl++ ++++ykal++s+ + a+++f ++ P+l f++ XP_019195005.1 42 LIKLLFTCASHVSSGDLHQADVCLRQIFQFSSASNDSMHRLATWFASALAVRLVKRWPGVYKALNCSSLM---KFDLDRARSIFTKALPYLGFAY 133 689******************************************************************8...6677778999************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 + N+++++a+ ge+ vH++D++ s + W+++++ La+ p+gpp+lRiT v+s +k++l ++g rL+k Ae+l+++f+fn+ v +l dl+ XP_019195005.1 134 AVINRTLVQAMLGERVVHVVDLGSSDPKLWVPFMRILATSPDGPPHLRITCVSS----NKNALDKLGVRLKKEAEQLDMSFQFNP-VNVHLRDLN 223 ******************************************************....99*************************.7999***** PP GRAS 191 leeL.rvkpgEalaVnlvlqlhrll.............desvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269 ++++ +v +gEala +vl+lh ll ++s ++++ + de+L+ + slsPk+v +veqe++hn +++++rf+e l+yysa+fd XP_019195005.1 224 FSSIvKVTSGEALAFISVLNLHVLLaeddridaqfglnKDSKNIKHckHADEFLEKLCSLSPKLVMLVEQESNHNLQKLVDRFVEGLRYYSAMFD 318 **9967888****************************9555555555599********************************************* PP GRAS 270 sleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWk 363 s+++ + + eer vE++ +g+ei+n+vac g er+erh ++++W rl++a F+pv+l +++++a + ++ +++dgy++ +++gsl++gW+ XP_019195005.1 319 SINVAFKGALcEERLLVEEM-IGKEIENIVACDGLEREERHDKFANWMVRLGRAKFRPVRLWGDTMDDAIRFVESYGVDGYKISSQKGSLMIGWH 412 **999876667********9.************************************************************************** PP GRAS 364 drpLvsvSaWr 374 drp++svS W+ XP_019195005.1 413 DRPIYSVSGWT 423 **********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence |
MSSQLSLSKS NVSLSLSLSP TTTSTDGAIC DVLKSENNGI KLIKLLFTCA SHVSSGDLHQ 60 ADVCLRQIFQ FSSASNDSMH RLATWFASAL AVRLVKRWPG VYKALNCSSL MKFDLDRARS 120 IFTKALPYLG FAYAVINRTL VQAMLGERVV HVVDLGSSDP KLWVPFMRIL ATSPDGPPHL 180 RITCVSSNKN ALDKLGVRLK KEAEQLDMSF QFNPVNVHLR DLNFSSIVKV TSGEALAFIS 240 VLNLHVLLAE DDRIDAQFGL NKDSKNIKHC KHADEFLEKL CSLSPKLVML VEQESNHNLQ 300 KLVDRFVEGL RYYSAMFDSI NVAFKGALCE ERLLVEEMIG KEIENIVACD GLEREERHDK 360 FANWMVRLGR AKFRPVRLWG DTMDDAIRFV ESYGVDGYKI SSQKGSLMIG WHDRPIYSVS 420 GWTCFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-100 | GRAS family protein |