PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 302aa MW: 33967.2 Da PI: 4.8437 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.8 | 1.5e-16 | 44 | 93 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e+E+rRR++iN++f+ Lr l+P+ + K +Ka+ L ++++YI+sLq XP_019194985.1 44 RSKHSEAEQRRRSKINERFQILRNLIPEK----DNKRDKASFLLEVIQYIQSLQ 93 889*************************8....799*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MLRAAMNHSD EDDDMEFSSR SVDGFSQKVK VEGRSGDQKA NVVRSKHSEA EQRRRSKINE 60 RFQILRNLIP EKDNKRDKAS FLLEVIQYIQ SLQGRIQMYE GGCQDWSQEP SELMPWRSSS 120 GAVGHSELIR NGSAHEDNGV LDQTILANAH DSTESDPSAE VLYKTMDDLQ RLTNEATSFG 180 MQMQPSFFEG SIENLASQSQ FFYWTDEQNE TQRAAPGCSQ NGQEEPETGG GEAGISNEFS 240 QRLMNTLNRT LASLGVDMLQ ANVSVQLDID KHTDTSSGAN LTRLSSRTTW DHPHKKLRKE 300 QS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 5e-43 | bHLH family protein |