PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194672.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 337aa    MW: 37731.2 Da    PI: 9.0975
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.45.7e-53141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeel+v+yL++kv+g++++l ++i ++d+yk++PwdLp++++ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ 
  XP_019194672.1  14 LPPGFRFYPTDEELLVQYLCRKVAGHDFSL-QIIGDIDLYKFDPWDLPSRANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT- 106
                     79***************************9.89***************99999*************************************9999. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_019194672.1 107 QGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MGVKDMDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FSLQIIGDID LYKFDPWDLP  60
SRANFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTQGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLS EAPRKTGSAR LDEWVLCRIY KKNSSSAAAA AQKPVSGVQS  180
KDYSHGSSSS SSSQFDDMLE SFPEINDQYF TLPRINSLKN LNLQQDDKSS IQRLSSGSFD  240
WATLASIPEL GPGNQIPQSG HLNHANPADI YGHSMAALSF PVDDEAQSGM RSSQRVENNS  300
GIYQPQNPNP FTHNFSNLLD PFGIRYPNQP GSLAFRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-127NAC family protein