PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 28356 Da PI: 9.4318 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.6e-31 | 26 | 75 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_019194409.1 26 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 75 79***********************************************8 PP | |||||||
2 | K-box | 101.9 | 8.7e-34 | 94 | 190 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ s++ea+++ +qqe+akL+++i+++q++++++lGe+L+ L++keL++Le ++ek++ ++RskKnell+++ie +qk+e elq++n++Lr+k+ XP_019194409.1 94 TNTGSVSEANTQFYQQESAKLRRQIREIQTSNKQILGESLGVLNHKELKNLEGKVEKAIGRVRSKKNELLFSEIELMQKREIELQNANMYLRAKI 188 334449****************************************************************************************9 PP K-box 99 ee 100 e XP_019194409.1 189 SE 190 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEFPNQALEE EESSHRKSGR GKIEIKRIEN TTNRQVTFCK RRNGLLKKAY ELSVLCDAEV 60 ALIVFSTRGR LYEYANNSVR ATIDRYKKHH SDSTNTGSVS EANTQFYQQE SAKLRRQIRE 120 IQTSNKQILG ESLGVLNHKE LKNLEGKVEK AIGRVRSKKN ELLFSEIELM QKREIELQNA 180 NMYLRAKISE FERAQQQMNL MPGSEYQETM TTSQTYDAHN FLPLTLLEPN QHYSRHDQTA 240 LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 1e-115 | MIKC_MADS family protein |