PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 520aa MW: 56336.9 Da PI: 8.1948 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.5e-05 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_019194402.1 87 FVCEICNKGFQRDQNLQLHRRGH 109 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.7 | 0.00039 | 164 | 186 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_019194402.1 164 WKCDKCSKRYAVQSDWKAHSKTC 186 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 520 aa Download sequence |
MMMKGLVIQQ PHSALDQENM SNLTSTASGE ASVSDTNGGI YPHQQQVFAN PNQSQPVKKK 60 RNQPGNPDPD AEVIALSPKT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRSN 120 KEVIRKKVYV CPEASCVHHE PARALGDLTG IKKHFCRKHG EKKWKCDKCS KRYAVQSDWK 180 AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAEESA RRVMTGSQIH HPSQPGCSSA 240 SNINFQFPAF QPPQVGSHGD HSASPAFPSV KKEQQHYNGM GISGGGGFNL RPEIPPWLIT 300 CQPLVGATHG PPPPLFHPGG LDFLHHHHQE FTQVQNPNPN NNLGGGPTLP PFHPTASSPQ 360 ISATALLQRA AQMGATGIGS GTASSAAPAM LMIGPHTDHV SADQAKNLSS REAVAGDDVI 420 SSSAAAAPPH GGSLLHDITA GATSFSSSTT DPHGFDASSF EDPFGGINGA NDDMTKDFLG 480 LRPLSHSDIF NITSLVDNPA SDHHHHHHHH QPQVQKAWPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 127 | KLKQRSNKEVIRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13810.1 | 1e-121 | C2H2 family protein |