PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194395.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 441aa MW: 47416.5 Da PI: 6.3635

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.9	9.6e-28	167	221	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ XP_019194395.1 167 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 221 5689***************.******************************86 PP
2	Myb_DNA-binding	39.5	1.3e-12	170	219	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_019194395.1 170 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 219 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLAVSPLRST TTSGKDEMEG FPMGCHDDFP DFTGGNLLDS IDFDDLFVGI HDGDVLPDLE 60 MDPEVLAEFS ISGGEEYSDT TTATATSVLL SSEKVACAED KEAENLGSSS NSGSDLGSGL 120 TSLNQGGEEI LSKRDENTNP SPKENYDNNK GKKSSAQSKN NPQGKRKVKV DWTPELHRRF 180 VQAVEQLGVD KAVPSRILEL MGIDCLTRHN IASHLQKYRS HRKHLLAREA EAANWSQRRQ 240 MYGGAAAGGG GGGGKREMSP WLAPTMGFPP PPMPHFRPLH VWGHPSVDQS LMHNMWPKHH 300 QLAASTSPPP PAWPAAAAPP PPLTDPSFWH SHHQRVATPC FPAPIAPARF PAPPVPGIPP 360 PAMYKLDPGI GVPTAPAAAA QPLPRPPFDF HPSKESIDAA IGDVLSKPWL PLPLGLKPPS 420 TDTVMVELQR QGISKVPPSC A

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLAVSPLRST TTSGKDEMEG FPMGCHDDFP DFTGGNLLDS IDFDDLFVGI HDGDVLPDLE  60
MDPEVLAEFS ISGGEEYSDT TTATATSVLL SSEKVACAED KEAENLGSSS NSGSDLGSGL  120
TSLNQGGEEI LSKRDENTNP SPKENYDNNK GKKSSAQSKN NPQGKRKVKV DWTPELHRRF  180
VQAVEQLGVD KAVPSRILEL MGIDCLTRHN IASHLQKYRS HRKHLLAREA EAANWSQRRQ  240
MYGGAAAGGG GGGGKREMSP WLAPTMGFPP PPMPHFRPLH VWGHPSVDQS LMHNMWPKHH  300
QLAASTSPPP PAWPAAAAPP PPLTDPSFWH SHHQRVATPC FPAPIAPARF PAPPVPGIPP  360
PAMYKLDPGI GVPTAPAAAA QPLPRPPFDF HPSKESIDAA IGDVLSKPWL PLPLGLKPPS  420
TDTVMVELQR QGISKVPPSC A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	3e-75	G2-like family protein