PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 619aa MW: 67945.5 Da PI: 5.4685 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.1 | 9.6e-09 | 502 | 550 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_019194347.1 502 PWTLNEVIKLVEGVSRYGVGRWSEIKRLAFancPYRTSVDLKDKWRNLL 550 8***************************9999*9*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 619 aa Download sequence |
MESVIGVETD GEAKVEDSVV EAINSVSSCL PEETADPIVY KLVRVDGDGR LVPATDDEVM 60 AVEDLLEDDK CEVGQVIDAE QTVECNKIEA YHLGKTQFEN PQGQPFSEIH EADVVTFNVS 120 HKLLPDTDNV NAQGKATVPP LTSEYSTVDK SGSAEGCSAP SDAFSENNLL ASKAGASWKP 180 DFSKLKGEIC LENLTVKELH ETFKATFGRD TSVKDKQWLK RRISMGLSNS CDFSCTSFVI 240 EDSRVVKKVK ENIASVNGSI SKDPIVALPN INSGSSSGHD DKVESPANIT EGNIPNSTLE 300 GCIVSEGHNM EQTAAKRVRK PTKRYIEELS EVESRESSGK SMSSEKICGY KSTHPSNHVI 360 SIMKARPDGK PFIMRQDSLG GSGVQIPCVS RIRRGRPREN FMNLLKLQPN GTDMAAELVK 420 NVGDTQIDQT DEVLKTSLSP GWIQQPLITS TEEGKHFPES KIIEVGSNME HENMDLYEDH 480 SDDSMMAMPT PKGGMRRKHH RPWTLNEVIK LVEGVSRYGV GRWSEIKRLA FANCPYRTSV 540 DLKDKWRNLL KASNVQLPAE KGIQNSRKQA AILIPTSILL RVRELAEMQG HISPSLNQSK 600 FAGLGSGGRS ADEGRVGYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 5e-99 | MYB_related family protein |