PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRAS | ||||||||
Protein Properties | Length: 534aa MW: 60035.8 Da PI: 5.0368 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 440.8 | 9.5e-135 | 165 | 534 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L++cA+a++++d +a++ +++l++++s g+p+qRl ay++e++ arla+s+s++ykal+++e + s e ++++ l++ev+P++kf++l XP_019194099.1 165 KESLVACAKAIEDNDIPRAEWWMSELRTMVSVCGEPIQRLGAYMLEGMVARLASSGSSIYKALRCKEPT---SNELFSYMYLLYEVCPFFKFGYL 256 789*****************************************************************9...8999999999************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI++a++ eervHiiDf+isqG+QW++L++aLa+Rp+gpp++ iTg+++++s + le +g+rL+ +Ae+++vpfef++ va +++d+ XP_019194099.1 257 SANGAIVDAMKDEERVHIIDFQISQGTQWITLIHALAARPGGPPQICITGIDDSTSAhaRGGGLEIVGKRLSTLAESCKVPFEFRP-VAASCADV 350 *****************************************************9888889999***********************.7999**** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 ++e+L+v+pgEalaVn+ l lh+++de+v ++++rd+++++v+sl Pkvv++veqe+d+n+ +F+ rf+e+l+yy a+f+s+++ lpr+++eri+ XP_019194099.1 351 KIEHLNVRPGEALAVNFPLVLHHMPDEDVGTQNHRDRLVRMVRSLFPKVVTLVEQESDTNKVPFFPRFVETLNYYLAVFESIDVALPRDHKERIN 445 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 vE+++l+re+vn++aceg+er+erhe lekWr+r+++aGF+p+pls+++++++k+ll+++ +d y++ee++++l+lgW++r+Lv+ +aW+ XP_019194099.1 446 VEQHCLAREVVNILACEGEERVERHEVLEKWRSRFSMAGFTPYPLSSSVNATIKTLLENYCKD-YTLEERDQALYLGWMNRALVASCAWQ 534 *************************************************************77.*************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence |
MQPSQNNMNM DGSRRFYNQP VQDLESYCLP TPGGLDNQFL AVGGAEFFAQ TNDQYHDVMS 60 YGYPGHSYTA DSFLSDTSGI LQQDSQLYLA DVHHHSPEET YHSAASKSSL TDENDLKHKL 120 RELESAMFGH GSEAYGSNMG NPDQMSSEAE KLEEMMGITS RRGLKESLVA CAKAIEDNDI 180 PRAEWWMSEL RTMVSVCGEP IQRLGAYMLE GMVARLASSG SSIYKALRCK EPTSNELFSY 240 MYLLYEVCPF FKFGYLSANG AIVDAMKDEE RVHIIDFQIS QGTQWITLIH ALAARPGGPP 300 QICITGIDDS TSAHARGGGL EIVGKRLSTL AESCKVPFEF RPVAASCADV KIEHLNVRPG 360 EALAVNFPLV LHHMPDEDVG TQNHRDRLVR MVRSLFPKVV TLVEQESDTN KVPFFPRFVE 420 TLNYYLAVFE SIDVALPRDH KERINVEQHC LAREVVNILA CEGEERVERH EVLEKWRSRF 480 SMAGFTPYPL SSSVNATIKT LLENYCKDYT LEERDQALYL GWMNRALVAS CAWQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |