PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019193841.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 189aa MW: 20147.2 Da PI: 6.1263 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 182.7 | 3e-57 | 17 | 112 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrkt+ngddllwa++tlGfedyveplk yl+++r++ege XP_019193841.1 17 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTVNGDDLLWAMTTLGFEDYVEPLKGYLQRFRDMEGE 111 89********************************************************************************************9 PP NF-YB 97 k 97 + XP_019193841.1 112 R 112 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MADSDNESGG HRESSPREQD RFLPIANVSR IMKKALPANA KISKDAKETV QECVSEFISF 60 ITGEASDKCQ REKRKTVNGD DLLWAMTTLG FEDYVEPLKG YLQRFRDMEG ERTAMVGRQE 120 RESSSGGGGN GGYAGESGVY GMMMGQHHGH IYGSGAYNPM GGGGSGNPGS GYIGSGAPPA 180 ADRPSRLGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 5e-75 | NF-YB family protein |