PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193671.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 201aa    MW: 22258.7 Da    PI: 7.7232
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.91.1e-4174150177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqve+C adl+ ak+yh+rhkvCevh+kap+vl++g+ qrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk++
  XP_019193671.1  74 CCQVEKCGADLTFAKTYHKRHKVCEVHAKAPAVLLNGVDQRFCQQCSRFHEVSEFDDAKRSCRRRLAGHNERRRKAS 150
                     6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MEAHNHGGRL ASTVKAKREV EGEEEDDEME EEEEENEDDD QCRHLRKKKM DVGLGKKVSS  60
PGGVAGGVTA AAACCQVEKC GADLTFAKTY HKRHKVCEVH AKAPAVLLNG VDQRFCQQCS  120
RFHEVSEFDD AKRSCRRRLA GHNERRRKAS SSSSSCENRG GESRRRVEAP LKQESKQCSR  180
GGSQLIISAA GTSSYDNFHI H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.19e-35SBP family protein