PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193348.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 328aa    MW: 34968.8 Da    PI: 8.3986
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.22.2e-6421451149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+v++DGttyrkg++p e+++  g s+sas++ss+q
  XP_019193348.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYPLPKHCDNNEVLKALCNEAGWTVDPDGTTYRKGCRPVESTDFLGGSTSASTCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsss 149
                             +sp++sy++sp+sss+psp+s++ + ++ +   +sl+p+l++ls+ sss
  XP_019193348.1  97 --------TSPCTSYNPSPASSSMPSPASSSYVAANVSvegNSLIPWLRNLSSGSSS 145
                     ........9******************99988877655778**********997766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY PLPKHCDNNE VLKALCNEAG  60
WTVDPDGTTY RKGCRPVEST DFLGGSTSAS TCSSYQTSPC TSYNPSPASS SMPSPASSSY  120
VAANVSVEGN SLIPWLRNLS SGSSSASSSK FPHFYLHGGS ISAPVTPPLS SPTGRTPRIR  180
TDWNGPSACV GWGGPHYSFL PSSTPVSPSR QTHPPHSEWL AGIQIPHGGA TSPTYSLVSP  240
NPLGFKAQTL PHHRGSLIST PGQSGTCSPA IAAGFDHTAD VPMAEAVSDE FAFGSNTAGF  300
VKPWEGERIH EECGPDDLEL TLGSSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-107BES1 family protein