PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019193209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 579aa MW: 65100.4 Da PI: 4.7921 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 66.7 | 3.4e-21 | 132 | 233 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 f kvlt+sd+ ++ l++p++ a ++ ++++s++l+ +d +g W +++ +r+++ r +ltkGWk Fvk+++L +gD++vF + ++ XP_019193209.1 132 FSKVLTTSDTRSNWGLCIPRRDAINCfpaldTTQEKSSQMLIARDIHGSDWCFQHVFRGHPPRhLLLTKGWKAFVKSKELVAGDSFVFI--RGEN 224 88*********************999***99666678999*****************9999887999**********************..4499 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++++v+v+r XP_019193209.1 225 GQMHVGVRR 233 999****98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 579 aa Download sequence |
MMDGQVGSSQ HQQLVELHCF DEAADYLYEE LWKACADPLM CVPTCGQRVF YFPGVHMDQL 60 DNSTNPEVID QQQISNLPPK VLCRVVNVQL LAKQETDEAY AQITLIPQPF ETGVNTVDPC 120 LHESPRSQFH SFSKVLTTSD TRSNWGLCIP RRDAINCFPA LDTTQEKSSQ MLIARDIHGS 180 DWCFQHVFRG HPPRHLLLTK GWKAFVKSKE LVAGDSFVFI RGENGQMHVG VRRLVYQQSC 240 VGLSRTSRQT KQVLGAVISQ AIATQTLFVV NYEARTSQCI ISLNKHLQSV ASGINLSVYY 300 EGEGYQHRRS EGNDEQMEEV DGTIYPLPQP TTISSEVDWE GLYDILESPD PLELDHEGGT 360 GENDERFNNL GNQDPSPILQ HHGEESGMGD IPMAIQEGSL QAMDISSIPS QIPYGGPGRG 420 DEKIPWGGYL VAQRCIPTLN RVISRYPDSL LGFKPWSNAV KPTFLEVLAE LVYLLERFTV 480 ESLGRSRDEF NTAKQFLWDL KNSGINVNWV ETRLVQIDEA LEKQSLMQQQ KELMLKYEEA 540 RSALGKVEED LGSVNMQLEE LSSHNHHPAT NKPILEGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46530.1 | 3e-90 | ARF family protein |