PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193007.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 296aa    MW: 33256.5 Da    PI: 8.9825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.43.5e-33642041128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+P+d+e++ e+L++kv+ ++      ++++ + ++   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++      + 
  XP_019193007.1  64 LPAGVKFDPSDQEIL-EHLEAKVSLDShklhplIDEFIHtLEGEdGICYTHPEKLP-GVTKDGLVRHFFHRPSKAYTTGTRKRRKVHtdvdgnET 156
                     799***********9.99****999985554432222222444435**********.555566788******************74444555588 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v + kg ++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_019193007.1 157 RWHKTGKTRPVAA-KGMVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 204
                     8***********9.999***********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MTCSSDSGED RPARLFAQNS GGNNNNNSVT INEITRRSGM RACPSCGHPI KCEQKAGIHN  60
LPGLPAGVKF DPSDQEILEH LEAKVSLDSH KLHPLIDEFI HTLEGEDGIC YTHPEKLPGV  120
TKDGLVRHFF HRPSKAYTTG TRKRRKVHTD VDGNETRWHK TGKTRPVAAK GMVKGYKKIL  180
VLYTNYGKQR KPEKTNWVMH QYHLGDDEDE KEGELVVSKV FYQTQPRQCG SLLRDSPPLL  240
QAGPPAGRKP GSHLREASTM VESFNPTLIS FDQFDHNRPT SRLLPTFNMH DTSFIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-110NAC family protein