PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192995.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 353aa MW: 39127.9 Da PI: 9.3205

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.6	1.5e-54	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkkv++ ++++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ XP_019192995.1 15 LPPGFRFHPTDEELVVHYLKKKVASAPIPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTA 108 79**************************.88***********988899***********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl XP_019192995.1 109 gGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 142 77788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MESTDSSSGS QQPQLPPGFR FHPTDEELVV HYLKKKVASA PIPVAIIAEV DLYKFDPWEL 60 PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTAGG TQKVGVKKAL 120 VFYGGKPPKG VKTNWIMHEY RLADNKTSNK PPGLDIANRS KGGSLRLDDW VLCRIYKKNN 180 SQRPLDHESD DLNDMLQGSI PPFVTHQKMG LKPSNYGALL QTDHHHHHHH MFDQGLVPGD 240 ASLGGARTAQ LPFVPSTPNL LPTKRSLPGL FWNVDDSSAN NHHPADASPP TKRFLADNNE 300 ASISRSDEQN GSIATLLSHL PQTPSLHQQT MLGALNDGVF RQPYQVSGIN WYS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MESTDSSSGS QQPQLPPGFR FHPTDEELVV HYLKKKVASA PIPVAIIAEV DLYKFDPWEL  60
PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTAGG TQKVGVKKAL  120
VFYGGKPPKG VKTNWIMHEY RLADNKTSNK PPGLDIANRS KGGSLRLDDW VLCRIYKKNN  180
SQRPLDHESD DLNDMLQGSI PPFVTHQKMG LKPSNYGALL QTDHHHHHHH MFDQGLVPGD  240
ASLGGARTAQ LPFVPSTPNL LPTKRSLPGL FWNVDDSSAN NHHPADASPP TKRFLADNNE  300
ASISRSDEQN GSIATLLSHL PQTPSLHQQT MLGALNDGVF RQPYQVSGIN WYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-102	NAC family protein