PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192908.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 401aa MW: 44549 Da PI: 4.7515

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	188	242	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGG ekAtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_019192908.1 188 KPRMRWTPELHEVFVEAVNKLGGMEKATPKGVLNLMKVEGLTIYHVKSHLQKYRT 242 79****************************************************8 PP
2	Myb_DNA-binding	53	7.6e-17	190	241	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ XP_019192908.1 190 RMRWTPELHEVFVEAVNKLGGMekaTPKGVLNLMKvEGLTIYHVKSHLQKYR 241 89****************88***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MNMHPAVFLQ ISSEAEHSKI GVSGAISTSL PILPLIEERY PKLPDALHSR SENKETTNSF 60 SSMTIPSASN NVGSWGNDAY QEFLEYKPNI SVQNGQVETL AGVMSSDEYA KRKDWQEWAD 120 QLINDDDTLD PNWSDILVDV NFPDPEPKML PGPTDVPVSQ PQLNHLTPTS SGQNCPSAGP 180 LSTATLTKPR MRWTPELHEV FVEAVNKLGG MEKATPKGVL NLMKVEGLTI YHVKSHLQKY 240 RTARYKPEPT EVGSSEKKPV TIPDLASFDL KPGMGITEAL RLQMEVQKQL HEQLETQRKL 300 QLQIEEQGKY LQMMYEKTRE MEKELKASSS SKPDEHPLSP PPSDNQEPLN LDNTNAELSA 360 NDANSSGVLL TQNQSSETSS QENIACEPPM KRARANETAV C

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MNMHPAVFLQ ISSEAEHSKI GVSGAISTSL PILPLIEERY PKLPDALHSR SENKETTNSF  60
SSMTIPSASN NVGSWGNDAY QEFLEYKPNI SVQNGQVETL AGVMSSDEYA KRKDWQEWAD  120
QLINDDDTLD PNWSDILVDV NFPDPEPKML PGPTDVPVSQ PQLNHLTPTS SGQNCPSAGP  180
LSTATLTKPR MRWTPELHEV FVEAVNKLGG MEKATPKGVL NLMKVEGLTI YHVKSHLQKY  240
RTARYKPEPT EVGSSEKKPV TIPDLASFDL KPGMGITEAL RLQMEVQKQL HEQLETQRKL  300
QLQIEEQGKY LQMMYEKTRE MEKELKASSS SKPDEHPLSP PPSDNQEPLN LDNTNAELSA  360
NDANSSGVLL TQNQSSETSS QENIACEPPM KRARANETAV C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	4e-86	G2-like family protein