PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019192776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 981aa MW: 110241 Da PI: 5.0045 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.1 | 9.8e-14 | 8 | 53 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_019192776.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 32.8 | 1.6e-10 | 60 | 103 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_019192776.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 981 aa Download sequence |
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEAGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDVRHR KRKRKGIDYN AEIPFEKKPP PGFYDVTDED RTVEQPKFPT 240 TIEELEGERR VDKEARLRKQ DIARNKIAQR QDAPSAILHA NKLNDPETVR KRTKLNLPAP 300 QISDHELEAI SKFGIASDLI GSEELLEGNA ATRALVANYT QTPRQGMTPL RTPQRTPANK 360 QDAIMMEAEN QRRLSQSQTP LLGGENPMLH PSDFSGVTPK KKEIQTPNPL LTPSATPGGT 420 GLTPRIGMTP SSDGYSFGMT PKGTPMRDEL HINEEMDMDG GKVGRSDSRR ELRSGLQGLP 480 NPKNEYQIVM QPLPEESEEP EEKIEEDMSE RIAREKAEEE ARQQALLRKR SKALQRDLPR 540 PPAASLDLIK SSLIRADEDK SSFVPPTLIE QADELIRKEL LSLLEHDNVK YPIDEKSEKE 600 KKKGTKRKSV PVPVIEDFEE DELKEAEDLI KGEAQFLRVA MGHETESVDE FVEAHKTCSS 660 DIMYFPTRNA YGLSSVAGNM EKLSALLSEF ENVKKKMNDD TKKAQKLEQK VKVLTNGYQF 720 RAGKFWSQIE ATFKQMDTAG TELECFQVLQ KQEQLAASNR INNIWEEVQK QKELERTLQK 780 RYGDLLVEKE RIEHLMDEYK KQAQMQEIEA KNRALELAKA EGDAADNKMI VAPSNEDPEP 840 VASVNEHESS TAVDPAQESP NKQTEDVSSM ADDTAQENPN EQTDNAQEQP SGSPKAGMDI 900 DEVGNTTDTN DLSHTTPAAR ESCLTDEVHA ENACNESESG IVSSGSPQLM NADDNPTSGN 960 DGSASASAEA SVSPIAEDQV S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 205 | KRRELKAAGIDVRHRKRKRK |
2 | 200 | 205 | RKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |