PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192674.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 275aa    MW: 30887.6 Da    PI: 5.1145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20120170255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  XP_019192674.1 120 HYRGVRQRP-WGKFAAEIRDP---NkKGARVWLGTFDTAVEAAKAYDRAAFKLRG 170
                     7********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGSPAEVSAL EFIKHHLFDD GFPEIFCDNQ SPSSSESCVS ELKNDGFFTE CDQFLFPAPA  60
NTTASDITGE FEFESKPQVV SSPPRKFKDR KPNLNISVPQ PQVKSVKVKV VQDSGDENRH  120
YRGVRQRPWG KFAAEIRDPN KKGARVWLGT FDTAVEAAKA YDRAAFKLRG SKAILNFPLE  180
VENFRQGSEL PSVNSDRKRR RDSDADDEVV ITKEVKRELS EESDSQERLY AAVAATPLTP  240
SSWMTVWDYN DINGIFEMPP LSPLSPNLFS YGIKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197201RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-42ERF family protein