PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019192500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HSF | ||||||||
Protein Properties | Length: 440aa MW: 49463 Da PI: 4.8289 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 109.3 | 2.8e-34 | 107 | 199 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++ +++d++++ +isw ++++sfvv+d+++fa+++Lp++Fkh nf+SF+RQLn+Y F+k+++ + weF+++ F+kgkk+ll++ XP_019192500.1 107 FLSKTFAMVDDPNTDAIISWGASKKSFVVWDPHRFATELLPQHFKHANFSSFIRQLNTYKFRKIDSGR---------WEFANEAFQKGKKHLLKY 192 9********************999****************************************9988.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr+k++ XP_019192500.1 193 IKRRKQH 199 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MQNRQQTPSQ QPFFFFFSFN GASSELNRYH PFQEIENRAE GLFAPPEMVV ESSGIDGEVT 60 VKVEPPEVVV LDDCDVDYGC GDGGNGGLGL GLRSMEGVKE VGGPPPFLSK TFAMVDDPNT 120 DAIISWGASK KSFVVWDPHR FATELLPQHF KHANFSSFIR QLNTYKFRKI DSGRWEFANE 180 AFQKGKKHLL KYIKRRKQHN HPAMQQQGGA ENRVGACKNG AAEVELQKLR TDQSTLKMEV 240 MTLKQQQETT ESYLASIEEK LELAETRQKR MVVFMAKVLK NPLFIQCLIG KMKQNAALRG 300 CEATKKRRLA ALESHELLAK ATDDMIITTA NESVDVKPLV AQASLVDQSE VPMLFNGVES 360 NRSVEEQQAN IFSENFFAWE KLMEEDTMIY ENIVTAEEHQ SNIVYELEDM LAGDLVEQDN 420 CPVSVPQAIC EESSMGSLLD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 190 | 196 | LKYIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-72 | HSF family protein |