PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192424.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 347aa MW: 38022.9 Da PI: 6.0621

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.2e-32	85	138	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F++ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_019192424.1 85 PRLRWTPDLHLCFIHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 138 8****************************************************7 PP
2	Myb_DNA-binding	50.9	3.6e-16	86	137	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_019192424.1 86 RLRWTPDLHLCFIHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 137 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEAEETGQEL MKEGISCGST EDSKTGGPEL LEAEIEGEEE EEDDGKGEKG NNGSSSSNNS 60 TIEENNGKKL GNSGSVRQYV RSKTPRLRWT PDLHLCFIHA VERLGGQDRA TPKLVLQLMN 120 IKGLSIAHVK SHLQMYRSKK ADEPNPVTPN GRLLLGNGDS HIFNFSQLQR LQGFNPTPVT 180 TSLRFEDSSW SRHHQPYSSA YNPYLNGGAA TSSIMIRHGF GGNYVNGGRS EFPMMSRQCS 240 DNVRAQPPQL FPNQRFPATV QNEEGTAAAA VSGAVKRKMP DSDVNLDLNL SLKTRDGGGN 300 NEKRAKDDDK YEDSTNLSLS LFPSSPHPGR NNDDQTTAKN TTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEAEETGQEL MKEGISCGST EDSKTGGPEL LEAEIEGEEE EEDDGKGEKG NNGSSSSNNS  60
TIEENNGKKL GNSGSVRQYV RSKTPRLRWT PDLHLCFIHA VERLGGQDRA TPKLVLQLMN  120
IKGLSIAHVK SHLQMYRSKK ADEPNPVTPN GRLLLGNGDS HIFNFSQLQR LQGFNPTPVT  180
TSLRFEDSSW SRHHQPYSSA YNPYLNGGAA TSSIMIRHGF GGNYVNGGRS EFPMMSRQCS  240
DNVRAQPPQL FPNQRFPATV QNEEGTAAAA VSGAVKRKMP DSDVNLDLNL SLKTRDGGGN  300
NEKRAKDDDK YEDSTNLSLS LFPSSPHPGR NNDDQTTAKN TTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	7e-43	G2-like family protein