PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192386.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 189aa    MW: 20184 Da    PI: 8.6448
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00165880123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_019192386.1 58 FECKTCNRQFPSFQALGGHRASH 80
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MVNLNLPMKR GRELDSITAA MADCLMLLSR QHATAGDFSS AMMAAAAAPA ASAGGRVFEC  60
KTCNRQFPSF QALGGHRASH KRPRLMGDLS LQLPPASPPK PKTHECSICG VEFALGQALG  120
GHMRRHRSVM NNNDSHSSGH GDASAAEKSA ESGGRRALSL DLNLTPLEND LEFKFGKVAA  180
HHHVLDCFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.14e-37C2H2 family protein