PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192374.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 498aa MW: 53488.4 Da PI: 7.5952

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.6e-32	277	332	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_019192374.1 277 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 332 68****************************************************97 PP
2	Myb_DNA-binding	40.2	7.7e-13	279	330	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_019192374.1 279 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 330 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MMASSSELSL DCKPQHSYSM LLKSFGDQQQ TTTDHHQTSQ KLEEFLARLE EERLKIDAFK 60 RELPLCMQLL TNAMEASRQQ LQSYKANNQG GTRPVLEEFI PLKNSSSSCD NNGGAEKMAM 120 AAANMASDKA NWMTSAQLWS DQGNEGAGKK QHPSIGVASS PKENEIIGFS MSPKAGNLEK 180 RNNNNNGGGG PGAFLPFSKD RSSSGPPAPT LALASSCEDN VEADKKNNNN NVSEIIVNNP 240 PSKANNHSGD ASSMSQPDGQ TTSATAAAAA ATQPQRKARR CWSPDLHRRF VNALQMLGGS 300 QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPIPSP QTAATGAPQL VVLGGIWVPP 360 EYATAAATHS GSVAAATLYG AHPTVHAQQH YCATAAPQVA HHEFYAAPPP PPLHQLHQPL 420 LHHHHQLHMY KPPSHAHTHS SPVSGDRSES IEDGKSSASG GSWKGDSGSE NGGGERKVLV 480 LREEGEVGNN GTEISLKF

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MMASSSELSL DCKPQHSYSM LLKSFGDQQQ TTTDHHQTSQ KLEEFLARLE EERLKIDAFK  60
RELPLCMQLL TNAMEASRQQ LQSYKANNQG GTRPVLEEFI PLKNSSSSCD NNGGAEKMAM  120
AAANMASDKA NWMTSAQLWS DQGNEGAGKK QHPSIGVASS PKENEIIGFS MSPKAGNLEK  180
RNNNNNGGGG PGAFLPFSKD RSSSGPPAPT LALASSCEDN VEADKKNNNN NVSEIIVNNP  240
PSKANNHSGD ASSMSQPDGQ TTSATAAAAA ATQPQRKARR CWSPDLHRRF VNALQMLGGS  300
QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPIPSP QTAATGAPQL VVLGGIWVPP  360
EYATAAATHS GSVAAATLYG AHPTVHAQQH YCATAAPQVA HHEFYAAPPP PPLHQLHQPL  420
LHHHHQLHMY KPPSHAHTHS SPVSGDRSES IEDGKSSASG GSWKGDSGSE NGGGERKVLV  480
LREEGEVGNN GTEISLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-93	G2-like family protein