PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192373.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 504aa MW: 54230.3 Da PI: 7.7984

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.9	5.3e-29	277	329	1	53
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQ Y XP_019192373.1 277 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQVY 329 68*************************************************88 PP
2	Myb_DNA-binding	37	7.7e-12	279	329	1	47
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++q y XP_019192373.1 279 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQVY 329 568***************99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MMASSSELSL DCKPQHSYSM LLKSFGDQQQ TTTDHHQTSQ KLEEFLARLE EERLKIDAFK 60 RELPLCMQLL TNAMEASRQQ LQSYKANNQG GTRPVLEEFI PLKNSSSSCD NNGGAEKMAM 120 AAANMASDKA NWMTSAQLWS DQGNEGAGKK QHPSIGVASS PKENEIIGFS MSPKAGNLEK 180 RNNNNNGGGG PGAFLPFSKD RSSSGPPAPT LALASSCEDN VEADKKNNNN NVSEIIVNNP 240 PSKANNHSGD ASSMSQPDGQ TTSATAAAAA ATQPQRKARR CWSPDLHRRF VNALQMLGGS 300 QVATPKQIRE LMKVDGLTND EVKSHLQVYI HKTKYRLHTR RPIPSPQTAA TGAPQLVVLG 360 GIWVPPEYAT AAATHSGSVA AATLYGAHPT VHAQQHYCAT AAPQVAHHEF YAAPPPPPLH 420 QLHQPLLHHH HQLHMYKPPS HAHTHSSPVS GDRSESIEDG KSSASGGSWK GDSGSENGGG 480 ERKVLVLREE GEVGNNGTEI SLKF

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MMASSSELSL DCKPQHSYSM LLKSFGDQQQ TTTDHHQTSQ KLEEFLARLE EERLKIDAFK  60
RELPLCMQLL TNAMEASRQQ LQSYKANNQG GTRPVLEEFI PLKNSSSSCD NNGGAEKMAM  120
AAANMASDKA NWMTSAQLWS DQGNEGAGKK QHPSIGVASS PKENEIIGFS MSPKAGNLEK  180
RNNNNNGGGG PGAFLPFSKD RSSSGPPAPT LALASSCEDN VEADKKNNNN NVSEIIVNNP  240
PSKANNHSGD ASSMSQPDGQ TTSATAAAAA ATQPQRKARR CWSPDLHRRF VNALQMLGGS  300
QVATPKQIRE LMKVDGLTND EVKSHLQVYI HKTKYRLHTR RPIPSPQTAA TGAPQLVVLG  360
GIWVPPEYAT AAATHSGSVA AATLYGAHPT VHAQQHYCAT AAPQVAHHEF YAAPPPPPLH  420
QLHQPLLHHH HQLHMYKPPS HAHTHSSPVS GDRSESIEDG KSSASGGSWK GDSGSENGGG  480
ERKVLVLREE GEVGNNGTEI SLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	9e-91	G2-like family protein