PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191566.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 467aa MW: 51631.5 Da PI: 6.9458

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.1	1.5e-35	48	190	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv +k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_019191566.1 48 LPAGVKFDPTDQELI-EHLEAKVVAKEskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 140 799**********.99999885665443333333666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_019191566.1 141 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 190 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MNKNSSQVGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE AKPDWVGLPA GVKFDPTDQE 60 LIEHLEAKVV AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK 180 TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSSA AAVAAERSIT SGGDDPASKR 240 DSGGSGSCSS SKDNMNIHSH GDELSVAVGA AMSSYSAMEI QQLKATADHF SFLPFRKNFD 300 EAGIAVGAEA SMGREVPATG TCEGRDIAAD PHRAHHVTTH DPHHHHHHQL AAAFHNISRP 360 SHTISAIISP PPPLHHHHAS VILDDDPFHV PRIILPGDNF QQSQQQQQQH HKLGGRSTSE 420 LEELIMGCTT TSSDIKEGSS MAANQQETEW LKYTPFWPDP DNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MNKNSSQVGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE AKPDWVGLPA GVKFDPTDQE  60
LIEHLEAKVV AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK  180
TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSSA AAVAAERSIT SGGDDPASKR  240
DSGGSGSCSS SKDNMNIHSH GDELSVAVGA AMSSYSAMEI QQLKATADHF SFLPFRKNFD  300
EAGIAVGAEA SMGREVPATG TCEGRDIAAD PHRAHHVTTH DPHHHHHHQL AAAFHNISRP  360
SHTISAIISP PPPLHHHHAS VILDDDPFHV PRIILPGDNF QQSQQQQQQH HKLGGRSTSE  420
LEELIMGCTT TSSDIKEGSS MAANQQETEW LKYTPFWPDP DNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-176	NAC family protein