PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191478.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 410aa    MW: 45784.6 Da    PI: 8.6295
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00015351370323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk+F +++ L+ H++++
  XP_019191478.1 351 CSQCGKPF-NPEKLHAHMKSC 370
                     ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MEPHHHHHPP SVAAAAAAAE VRKLHIVYFL SRNGRIEHPH LIRVHHLSRH GVRLRDVKRW  60
MGELRGKELP ESYAWSYKRK YKTGYVWQDL VDDDLLTPIS DNEYVLKGSE ISSSTPTKEH  120
CYREKVVPMQ KDSLLEEEEE EAAKGSKPSA KEETDQSHHQ SPSDESRKTS SEIEEEESPV  180
FGSETSTMTD DSPAAKLEED QEMHDGRRSV DDADQKSSSL RSLFAKKKRG GGEDGDEEKN  240
GTPRSTTSNS TFGKSRSSSG GGGGSSSIFR NLISCGTVDT NDSAVLPMQR RRPAAASSAE  300
ICKPEKLGGS QRIYRTNWNQ EQQSKPRKSC DGVYNGGRRS FSGTYYKSPN CSQCGKPFNP  360
EKLHAHMKSC KGMKMWAKTT HPVSSAPEKD SERSVEKSTK NSVSARFLTR