PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191276.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 172aa MW: 19731.6 Da PI: 8.4836 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 29.9 | 7e-10 | 14 | 47 | 13 | 46 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgkl 46 f+k rn i+K A+ +S+LC+++v +i fs g++ XP_019191276.1 14 FCKARNAIIKRANQISTLCATNVVIICFSICGQM 47 9****************************98887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MSESEETRFQ MEYFCKARNA IIKRANQIST LCATNVVIIC FSICGQMFVS GDESIINAFE 60 EETVVAPQCT FTCTNHKSPG FFKLKRWRNK NNNSCSSSSV SSRRKEKNGV KSPINPPVNM 120 YEFSDKLNLP QIEQLEEKMK GFKEIIAQQY LFLSAQQNVL ESSTMQKDWL KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65070.3 | 7e-08 | MIKC_MADS family protein |