PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191141.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 285aa    MW: 31466.7 Da    PI: 8.423
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.92.2e-3263119259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     + vrY+eClkNhAa++Gg+a+DGCgEfmps geeg+ +al+C+AC+CHRnFHR+eve 
  XP_019191141.1  63 QMVRYRECLKNHAAAMGGNATDGCGEFMPS-GEEGSLEALTCSACNCHRNFHRKEVEG 119
                     679**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEIPSSHEDG EMPIPINSTY GHGHGQHIIM HHNQNNNNNH IIIPSAPPSS INGVPVESTA  60
KKQMVRYREC LKNHAAAMGG NATDGCGEFM PSGEEGSLEA LTCSACNCHR NFHRKEVEGE  120
PLLSLQIPPS PPCHCTYHHK RKVFVGAEPL GGVGYPRPPP HQMIMSYNMG GSLHPSDQSD  180
EHEEGGGGGG GGGGGVVLRP PLHQMGMVKK RFRTKFTQEQ KDKMLSFAER VGWKIQKQEE  240
SVVQQFCQEV GIKRRVLKVW MHNNKHNLAK KTIQNPNPNP PQIQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.18e-74ZF-HD family protein