PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191025.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 364aa MW: 40483.3 Da PI: 7.7913

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.4	2.9e-49	39	161	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp + +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++ XP_019191025.1 39 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP-A--IGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGEN 129 79*************************.89***********.3..4889************************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy+g+apkg +t+W+m+eyrl XP_019191025.1 130 SRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 161 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MAVLPEKMSQ QNQDERCQKN TEEEAAAAAA DDHEHDMVMP GFRFHPTEEE LVEFYLRRKV 60 EGKRFNVELI TFLDLYRYDP WELPAIGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG 120 ADRMIRGENS RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERLQ KAEISLCRVY 180 KRAGVDDHHP SLPRSLQTSR ASAAAAASSS SSRGPAAVKK LQEPSFSPYQ VAEEKISAET 240 SASSSTEVGT SLGLSSYQSS YAAAAAPPSA PFFSASSSAA SVDDLHRLVN SQQQISLQHP 300 QLFQTLSSPF PPPPLLHPLP PQPLALPPGS LHQAAAAAAF SDRLWDWSSM GEPSRDYGAG 360 NPFK

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MAVLPEKMSQ QNQDERCQKN TEEEAAAAAA DDHEHDMVMP GFRFHPTEEE LVEFYLRRKV  60
EGKRFNVELI TFLDLYRYDP WELPAIGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG  120
ADRMIRGENS RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERLQ KAEISLCRVY  180
KRAGVDDHHP SLPRSLQTSR ASAAAAASSS SSRGPAAVKK LQEPSFSPYQ VAEEKISAET  240
SASSSTEVGT SLGLSSYQSS YAAAAAPPSA PFFSASSSAA SVDDLHRLVN SQQQISLQHP  300
QLFQTLSSPF PPPPLLHPLP PQPLALPPGS LHQAAAAAAF SDRLWDWSSM GEPSRDYGAG  360
NPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-106	NAC family protein