PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191024.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 367aa MW: 40738.6 Da PI: 7.7913

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7e-50	39	164	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++ XP_019191024.1 39 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGEN 132 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy+g+apkg +t+W+m+eyrl XP_019191024.1 133 SRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 164 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MAVLPEKMSQ QNQDERCQKN TEEEAAAAAA DDHEHDMVMP GFRFHPTEEE LVEFYLRRKV 60 EGKRFNVELI TFLDLYRYDP WELPALAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK 120 ATGADRMIRG ENSRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE RLQKAEISLC 180 RVYKRAGVDD HHPSLPRSLQ TSRASAAAAA SSSSSRGPAA VKKLQEPSFS PYQVAEEKIS 240 AETSASSSTE VGTSLGLSSY QSSYAAAAAP PSAPFFSASS SAASVDDLHR LVNSQQQISL 300 QHPQLFQTLS SPFPPPPLLH PLPPQPLALP PGSLHQAAAA AAFSDRLWDW SSMGEPSRDY 360 GAGNPFK

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MAVLPEKMSQ QNQDERCQKN TEEEAAAAAA DDHEHDMVMP GFRFHPTEEE LVEFYLRRKV  60
EGKRFNVELI TFLDLYRYDP WELPALAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK  120
ATGADRMIRG ENSRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE RLQKAEISLC  180
RVYKRAGVDD HHPSLPRSLQ TSRASAAAAA SSSSSRGPAA VKKLQEPSFS PYQVAEEKIS  240
AETSASSSTE VGTSLGLSSY QSSYAAAAAP PSAPFFSASS SAASVDDLHR LVNSQQQISL  300
QHPQLFQTLS SPFPPPPLLH PLPPQPLALP PGSLHQAAAA AAFSDRLWDW SSMGEPSRDY  360
GAGNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-110	NAC family protein