PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019190939.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 533aa MW: 59458 Da PI: 7.2579 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.2 | 1.6e-27 | 291 | 344 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G + A+P++ile+mkv+gLt+++v+SHLQkYR++ XP_019190939.1 291 LKVDWTPELHKKFVKAVEQL-GVDAAIPSRILEVMKVEGLTRHNVASHLQKYRMH 344 5899****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 43.5 | 7.2e-14 | 293 | 342 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_019190939.1 293 VDWTPELHKKFVKAVEQLGVDaaIPSRILEVMKvEGLTRHNVASHLQKYR 342 57***********************************************7 PP | |||||||
3 | Response_reg | 29.3 | 4.3e-11 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d++ + + +r+ le+ +y +v ++++ eal + +k +++ ++ ++ ++d e++k +++++ +lp i+ + +++ +++ +G XP_019190939.1 20 VLLLDEDTNSAAEMRSKLEEMNY-IVSTFQKENEALLAISNKSeaFHVAIVEVNTGNSD--EAFKFLETAK-DLPTIMTSNIHCLNTMMKCIALG 110 7999999****************.***************777778***********965..5555565555.799999998888*********** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp + ++l++ XP_019190939.1 111 AVEFLQKPLSDDKLRN 126 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MVCTANDLLD WKDFPKGLRV LLLDEDTNSA AEMRSKLEEM NYIVSTFQKE NEALLAISNK 60 SEAFHVAIVE VNTGNSDEAF KFLETAKDLP TIMTSNIHCL NTMMKCIALG AVEFLQKPLS 120 DDKLRNIWQH VVHKAFNAGE KDVSESLKPV KESIVSMLQL ESRNSGADAQ NSSETIRENS 180 QEFSSDSDKY PAPSTPQLKQ GARSLDDSVE RDEESKSVET TCCNSGSSTN PAISPPVLLV 240 EASSIKGECK SSPDHKSRTD APVNVSNESA APNKPSRVNS SSGTKANKKK LKVDWTPELH 300 KKFVKAVEQL GVDAAIPSRI LEVMKVEGLT RHNVASHLQK YRMHRRQILP KDDAKRWPNP 360 RDSAQRSCFP RDPILAFPPY HSPYSIPTDQ YYPAWVQPGS YSSGVQMWGS PYHYPGWQST 420 DNWHWKPHPG AHANAWGCPV MPSPQGSYPT YPQNASGYYR ADGVQNRYHM LEKSIDFQPA 480 EEVIDKVVKE AINKPWLPLP LGLKPPSTEC VLNELLKQGI STIPHKINGS HTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-144 | ARR-B family protein |