PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019190069.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 830aa MW: 92749 Da PI: 7.6347

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019190069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.2	3.8e-29	538	588	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_019190069.1 538 EKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 588 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
MDGGLCPSFM DLDYMNELLC WVERSEGSDY MWPVLEANSN NNDQEERLQR SSLPENLSSG 60 FQYRTAISPW GQSRRCLVEG PGWCSITDRL VKAVEYINDF FRDKDVVLIQ IWVPVSKGDR 120 CVLTTRGQPF QVNKNCPQLA HYRDISVNFQ FPAEEDSNES TGLPGRVFLA KLPEWTPDVQ 180 FFKKDEYPRV CHAQEYDVRG SLAVPVFDQS SLSCLGVIEL VLTTQKINYL PQLQSVCKAL 240 EAVNLRGSIL PNARNAKECD LSYQAVLCEI HDVFKSACET HRLPLAQTWV PCIQQGKEGC 300 RHSDDNLIHC VSTVDSACYV ADPHVRGFHE ACSEHHLLKG QGLVGRAFVT NQACFSADLM 360 SSSKAEYPLA HYAKMFGLQA SVAIRLRSVS ISSAEFVLEF FLPRNCISPE EHKRMLTSLS 420 IIIQNVCQTL RVVTDQELQQ ETSGFMFSEE GLKPKRNLGV GAYEERLSGN SQHTDCHESR 480 DSVSAFENGQ SEVVLKKRCP RELRLQLNEC VPGPDRASSA CNSRGVGKRG DKKRLKTEKT 540 ITLQILQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIQHVID 600 SVQGVSGGLQ IESFYSSFPE LVSPNSASNQ FKNLKSPGGD STSPRAAAPA APVADSVTPS 660 SSCSQSSSSS QCCSTGRQPK NSDTNAVLKR VKSAAELHYS SRNEEPKTLP RCQSHASLIQ 720 RPPSRFLPPT TKGGGDCRPR EDVLRVKVSF GEEKIRLRVQ NSWGYEDLLN EIARRFGMDE 780 STGFQLKYLD DDSEWVLLTC DADLQECFDV CRSSLNQTIK LTFHRVPQQC

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

MDGGLCPSFM DLDYMNELLC WVERSEGSDY MWPVLEANSN NNDQEERLQR SSLPENLSSG  60
FQYRTAISPW GQSRRCLVEG PGWCSITDRL VKAVEYINDF FRDKDVVLIQ IWVPVSKGDR  120
CVLTTRGQPF QVNKNCPQLA HYRDISVNFQ FPAEEDSNES TGLPGRVFLA KLPEWTPDVQ  180
FFKKDEYPRV CHAQEYDVRG SLAVPVFDQS SLSCLGVIEL VLTTQKINYL PQLQSVCKAL  240
EAVNLRGSIL PNARNAKECD LSYQAVLCEI HDVFKSACET HRLPLAQTWV PCIQQGKEGC  300
RHSDDNLIHC VSTVDSACYV ADPHVRGFHE ACSEHHLLKG QGLVGRAFVT NQACFSADLM  360
SSSKAEYPLA HYAKMFGLQA SVAIRLRSVS ISSAEFVLEF FLPRNCISPE EHKRMLTSLS  420
IIIQNVCQTL RVVTDQELQQ ETSGFMFSEE GLKPKRNLGV GAYEERLSGN SQHTDCHESR  480
DSVSAFENGQ SEVVLKKRCP RELRLQLNEC VPGPDRASSA CNSRGVGKRG DKKRLKTEKT  540
ITLQILQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIQHVID  600
SVQGVSGGLQ IESFYSSFPE LVSPNSASNQ FKNLKSPGGD STSPRAAAPA APVADSVTPS  660
SSCSQSSSSS QCCSTGRQPK NSDTNAVLKR VKSAAELHYS SRNEEPKTLP RCQSHASLIQ  720
RPPSRFLPPT TKGGGDCRPR EDVLRVKVSF GEEKIRLRVQ NSWGYEDLLN EIARRFGMDE  780
STGFQLKYLD DDSEWVLLTC DADLQECFDV CRSSLNQTIK LTFHRVPQQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein