PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019190066.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 832aa MW: 92965.2 Da PI: 7.5479

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019190066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.2	3.8e-29	540	590	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_019190066.1 540 EKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 590 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
MDGGLCPSFM DLDYMNELLC WVERSEGSDY MWPVLEANSN NNDQEERLQR SSLPENLSSG 60 FQYRTAISPW GQSRRCLVEG PGWCSITDRL VKAVEYINDF FRDKDVVLIQ IWVPVSKGDR 120 CVLTTRGQPF QVNKNCPQLA HYRDISVNFQ FPAEEDSNES TGLPGRVFLA KLPEWTPDVQ 180 FFKKDEYPRV CHAQEYDVRG SLAVPVFDQS SLSCLGVIEL VLTTQKINYL PQLQSVCKAL 240 EAVNLRGSIL PNARNAKESE CDLSYQAVLC EIHDVFKSAC ETHRLPLAQT WVPCIQQGKE 300 GCRHSDDNLI HCVSTVDSAC YVADPHVRGF HEACSEHHLL KGQGLVGRAF VTNQACFSAD 360 LMSSSKAEYP LAHYAKMFGL QASVAIRLRS VSISSAEFVL EFFLPRNCIS PEEHKRMLTS 420 LSIIIQNVCQ TLRVVTDQEL QQETSGFMFS EEGLKPKRNL GVGAYEERLS GNSQHTDCHE 480 SRDSVSAFEN GQSEVVLKKR CPRELRLQLN ECVPGPDRAS SACNSRGVGK RGDKKRLKTE 540 KTITLQILQQ YFAGSLKDAA KSIGVCPTTL KRICRQHGIK RWPSRKIKKV GHSLQKIQHV 600 IDSVQGVSGG LQIESFYSSF PELVSPNSAS NQFKNLKSPG GDSTSPRAAA PAAPVADSVT 660 PSSSCSQSSS SSQCCSTGRQ PKNSDTNAVL KRVKSAAELH YSSRNEEPKT LPRCQSHASL 720 IQRPPSRFLP PTTKGGGDCR PREDVLRVKV SFGEEKIRLR VQNSWGYEDL LNEIARRFGM 780 DESTGFQLKY LDDDSEWVLL TCDADLQECF DVCRSSLNQT IKLTFHRVPQ QC

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

MDGGLCPSFM DLDYMNELLC WVERSEGSDY MWPVLEANSN NNDQEERLQR SSLPENLSSG  60
FQYRTAISPW GQSRRCLVEG PGWCSITDRL VKAVEYINDF FRDKDVVLIQ IWVPVSKGDR  120
CVLTTRGQPF QVNKNCPQLA HYRDISVNFQ FPAEEDSNES TGLPGRVFLA KLPEWTPDVQ  180
FFKKDEYPRV CHAQEYDVRG SLAVPVFDQS SLSCLGVIEL VLTTQKINYL PQLQSVCKAL  240
EAVNLRGSIL PNARNAKESE CDLSYQAVLC EIHDVFKSAC ETHRLPLAQT WVPCIQQGKE  300
GCRHSDDNLI HCVSTVDSAC YVADPHVRGF HEACSEHHLL KGQGLVGRAF VTNQACFSAD  360
LMSSSKAEYP LAHYAKMFGL QASVAIRLRS VSISSAEFVL EFFLPRNCIS PEEHKRMLTS  420
LSIIIQNVCQ TLRVVTDQEL QQETSGFMFS EEGLKPKRNL GVGAYEERLS GNSQHTDCHE  480
SRDSVSAFEN GQSEVVLKKR CPRELRLQLN ECVPGPDRAS SACNSRGVGK RGDKKRLKTE  540
KTITLQILQQ YFAGSLKDAA KSIGVCPTTL KRICRQHGIK RWPSRKIKKV GHSLQKIQHV  600
IDSVQGVSGG LQIESFYSSF PELVSPNSAS NQFKNLKSPG GDSTSPRAAA PAAPVADSVT  660
PSSSCSQSSS SSQCCSTGRQ PKNSDTNAVL KRVKSAAELH YSSRNEEPKT LPRCQSHASL  720
IQRPPSRFLP PTTKGGGDCR PREDVLRVKV SFGEEKIRLR VQNSWGYEDL LNEIARRFGM  780
DESTGFQLKY LDDDSEWVLL TCDADLQECF DVCRSSLNQT IKLTFHRVPQ QC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein