PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019189657.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 342aa MW: 38523 Da PI: 7.1407

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019189657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.6	1.4e-54	5	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv++ ++ +i++vd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ XP_019189657.1 5 LPPGFRFHPTDEELITYYLSNKVSDFGFSP-IAIADVDLNKCEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFRG 98 79***********************988.78***********988999***********************************98 PP NAM 96 .....kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgekt+Wvmheyrle XP_019189657.1 99 ggvhaQPQLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 137 666555556**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MEESLPPGFR FHPTDEELIT YYLSNKVSDF GFSPIAIADV DLNKCEPWDL PGKASMGEKE 60 WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGGG VHAQPQLVGM KKTLVFYRGR 120 APKGEKTNWV MHEYRLESKH GFKPTKEEWV VCRVFQKCNT IMKKPVQATS ASSPQSLDGS 180 PCDTNTTIAN ELGDIELPNF NTTTIMGSNG ILNNISLQSY NNNTNEGMNM NNLNMMNNNT 240 TLPLLPSWPP STSSLLTSNL SSVNSFLFRA LQLRGQAHHQ AAPITTSDYT CYNNNMPQFG 300 NNDLINSNDF TTTSTSSMVL DNSAANHHHH HQQQNPQDSH IW

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MEESLPPGFR FHPTDEELIT YYLSNKVSDF GFSPIAIADV DLNKCEPWDL PGKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGGG VHAQPQLVGM KKTLVFYRGR  120
APKGEKTNWV MHEYRLESKH GFKPTKEEWV VCRVFQKCNT IMKKPVQATS ASSPQSLDGS  180
PCDTNTTIAN ELGDIELPNF NTTTIMGSNG ILNNISLQSY NNNTNEGMNM NNLNMMNNNT  240
TLPLLPSWPP STSSLLTSNL SSVNSFLFRA LQLRGQAHHQ AAPITTSDYT CYNNNMPQFG  300
NNDLINSNDF TTTSTSSMVL DNSAANHHHH HQQQNPQDSH IW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-103	NAC family protein