PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019189194.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 303aa MW: 33736.1 Da PI: 6.6503

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019189194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.9e-08	252	285	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_019189194.1 252 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 285 469*****************************87 PP
2	ELK	26.3	1.7e-09	206	227	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_019189194.1 206 ELKIELKQGFRSRIEDVREEIL 227 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MQEEGVGLMG SGGGGGGGGL GLGDISSSMA AACGEQQRRL KAEMATHPLY EQLLAAHVAC 60 LRVATPIDQL PLIDAQLSHS HHLLRSYASN HSPSLSPHER QELDNFLAQY LLVLCSFKEQ 120 LQQHVRVHAV EAVMACREIE QNLQALTGAS LGEGTGATMS DDEDELAMQM DFSLDQSAGG 180 DGGHDLMGFG LPTESERSLM ERVRQELKIE LKQGFRSRIE DVREEILRKR RAGKLPGDTT 240 TVLKNWWQQH SKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHST SQSVTSLKSK 300 RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	283	303	RKRNWHSTSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-157	TALE family protein