PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188425.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 278aa MW: 31592.2 Da PI: 6.509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.6	3.5e-51	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deel+++yL +kv++++++ ++ evd++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ XP_019188425.1 10 LPPGFRFYPSDEELICHYLYNKVANQNVSK-GTLVEVDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVIDP 103 79***********************988.88***********87788899**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ vg++ktLvfyk+rap+g kt W+mhe+rle XP_019188425.1 104 tTRAIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138 66777*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MGLRDIGATL PPGFRFYPSD EELICHYLYN KVANQNVSKG TLVEVDLHTC EPWQLPEVAK 60 LNSSEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRTV IDPTTRAIVG MRKTLVFYKN 120 RAPNGIKTGW IMHEFRLENP HIPPKEDWVL CRVFHKSKIE TNNENNIMYD MASGSLEVCL 180 PSSAYRPAAP PYSHSHSPPN QTQNSSSTAN FFAAPADQRG FPQSSRHNTN NVAPSSNDYE 240 FLFDDMNFDD HPSMQDGGVH SSIEDMRFGD DENGLAFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	5e-92	NAC family protein