PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188403.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 473aa MW: 52175.1 Da PI: 5.4153

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.7e-33	257	311	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt+++vkSHLQkYR+ XP_019188403.1 257 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLRLMKVEGLTIYQVKSHLQKYRT 311 79****************************************************8 PP
2	Myb_DNA-binding	56.4	6.7e-18	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + r m +g+t +q+ks++qky+ XP_019188403.1 259 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLRLMKvEGLTIYQVKSHLQKYR 310 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEARPALSVQ STGAGQLSNC DAFGALSSPL HVLPTNLKDL YPKFPESQQV SLGRDIIQHP 60 PAVLCPISSD SGVVGHLLSS SSGSSGFSSD LKSSYVPPHE KHPKQPSFLS QSTTHSCILQ 120 AAASSHYAQE NNNSWCIDSF SDFLDYPINA PVQNSQLDYS NNGDCVFTSE DLSKHSDWQE 180 WAEQLITDDD AFTHDWNNIV ADTCPTDPGA KMQYQAPNQF SNVQNQQHQA SHHPTALSGD 240 ALIVGSASST ISGATTKQRM RWTPELHEAF VEAVNKLGGS ERATPKGVLR LMKVEGLTIY 300 QVKSHLQKYR TARYKPDSAE GSSEKKQTSV DDLPSLDLKT GIKITEALRL QMEVQKRLHD 360 QLEIQRNLQL RIEEQGRHLQ MMFERQCKSM PGIGLLKGLP STAENPNESD PRVPQSDHPK 420 TDDVVNVVTL SDDSQVLCEK QVECGEEVTE IPEKMWLDGS SNSRAIKRAK VDE

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEARPALSVQ STGAGQLSNC DAFGALSSPL HVLPTNLKDL YPKFPESQQV SLGRDIIQHP  60
PAVLCPISSD SGVVGHLLSS SSGSSGFSSD LKSSYVPPHE KHPKQPSFLS QSTTHSCILQ  120
AAASSHYAQE NNNSWCIDSF SDFLDYPINA PVQNSQLDYS NNGDCVFTSE DLSKHSDWQE  180
WAEQLITDDD AFTHDWNNIV ADTCPTDPGA KMQYQAPNQF SNVQNQQHQA SHHPTALSGD  240
ALIVGSASST ISGATTKQRM RWTPELHEAF VEAVNKLGGS ERATPKGVLR LMKVEGLTIY  300
QVKSHLQKYR TARYKPDSAE GSSEKKQTSV DDLPSLDLKT GIKITEALRL QMEVQKRLHD  360
QLEIQRNLQL RIEEQGRHLQ MMFERQCKSM PGIGLLKGLP STAENPNESD PRVPQSDHPK  420
TDDVVNVVTL SDDSQVLCEK QVECGEEVTE IPEKMWLDGS SNSRAIKRAK VDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	2e-84	G2-like family protein