PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019188364.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17481.3 Da PI: 10.0713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.6e-20 | 21 | 72 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+++AeIrdp+ ng +r +lg+f+tae+Aa+a+++a+ +++g+ XP_019188364.1 21 KYRGIRRRP-WGKYAAEIRDPNRNG--ARLWLGTFDTAEDAARAYDRAAYAFRGH 72 8********.**********96665..*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MRKRSGNVKM ENEERVRREN KYRGIRRRPW GKYAAEIRDP NRNGARLWLG TFDTAEDAAR 60 AYDRAAYAFR GHQAILNFPN DGHYASGGNV VAAAPGPSSS GSYSTPPPPS SPPPSSSSSV 120 YVPSFSTSED KIIEFEYLDN NLLEDLLGSQ VNKRSKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 4e-25 | ERF family protein |