PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188086.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 377aa MW: 38863.9 Da PI: 9.4894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.6e-39	62	120	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s XP_019188086.1 62 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS 120 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MVFSSIPAYL DPANWQQLNH QVGTSIQTTQ LPSAQPPHGS AGTIRPGSMA DRARLANMPI 60 PETALKCPRC ESTNTKFCYF NNYSLTQPRH FCKTCRRYWT RGGALRNVPV GGGCRRNKRS 120 GKGGSSSGGG GSASKSPSNS SERQAGSSSC SGVSTSSINI SGNSAAGLLG GAGLSPQIPP 180 MRFMSPLGQL SEHYTAGNDN IGLNINYTGL SAMAGRDNFP FQFGNNNNNN NNSNNNNNLL 240 GLGGGGGGGP GGGGGLASLL SGGIEQWRLQ TPILGGLDLS PSPGLYQFPG GPEAAPSGFL 300 GGEASETRPK FTSSSMLTTQ MASVKMEDHN NQESSMARQL LGFQPGNDQW GGGGGGAAAA 360 WSDVSASFTS SSTSNRL

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MVFSSIPAYL DPANWQQLNH QVGTSIQTTQ LPSAQPPHGS AGTIRPGSMA DRARLANMPI  60
PETALKCPRC ESTNTKFCYF NNYSLTQPRH FCKTCRRYWT RGGALRNVPV GGGCRRNKRS  120
GKGGSSSGGG GSASKSPSNS SERQAGSSSC SGVSTSSINI SGNSAAGLLG GAGLSPQIPP  180
MRFMSPLGQL SEHYTAGNDN IGLNINYTGL SAMAGRDNFP FQFGNNNNNN NNSNNNNNLL  240
GLGGGGGGGP GGGGGLASLL SGGIEQWRLQ TPILGGLDLS PSPGLYQFPG GPEAAPSGFL  300
GGEASETRPK FTSSSMLTTQ MASVKMEDHN NQESSMARQL LGFQPGNDQW GGGGGGAAAA  360
WSDVSASFTS SSTSNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	3e-43	Dof family protein